Ingest Clinical data

POST

/clinical

Add a list of donors with clinical data produced by the clinical ETL.

Parameters

Query Parameters

batch_size

integer

Number of items to be processed in one batch

Request Body

object

openapi_url

URL of schema used to generate this mapping

string

donors

Array<object>

A DonorWithClinicalData object, as specified in the schema in openapi_url

object

katsu_sha

The SHA of the version of Katsu used to generate the schema.

string

statistics

object

required_but_missing

For each schema, a count of required fields that are present vs missing

object

schemas_used

A list of schemas used in this dataset

Array<string>

cases_missing_data

A list of cases that have missing data

Array<string>

schemas_not_used

A list of schemas that are never used in this dataset

Array<string>

summary_cases

Overall completeness counts

object

complete_cases

How many cases have complete data

integer

total_cases

How many cases are in this dataset

integer

Responses

200

Success

object

queue_id

Queue ID to get status of ingest

string

warnings

Array<string>